In NAPS2 4.6.0, you can now customize the keyboard shortcuts in appsettings.xml. Also I've added a few new default shortcuts which you can see in the provided appsettings.xml file.
1) Open notepad as admin
2) C:\Program Files (x86)\NAPS2\appsettings.xml
3) Find the action you wany to add a shortcut for
4) Type the command and copy the tag to close line
5) Save
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